close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000007370Homeobox C5a. (226 aa)    
Predicted Functional Partners:
SMAX5B_015023
Homeobox protein HoxC4aa.
   
 
0.951
ENSSMAP00000007367
Homeobox C6a.
   
  
0.950
ENSSMAP00000024818
annotation not available
  
  
0.895
SMAX5B_008613
HoxD4b.
   
  
0.892
HOXA7
Homeobox A7.
   
  
0.757
ENSSMAP00000024863
Homeobox D4a.
   
  
0.757
ENSSMAP00000026441
Homeobox B4a.
   
 
0.754
ENSSMAP00000026391
annotation not available
   
  
0.746
ENSSMAP00000015550
Homeobox B6b.
   
 
0.723
ENSSMAP00000026397
annotation not available
   
 
0.711
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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