STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_017296Putative phosphatidylinositol-glycan biosynthesis class F protein. (219 aa)    
Predicted Functional Partners:
SMAX5B_019093
Putative GPI ethanolamine phosphate transferase 2 isoform 2.
    
 0.992
SMAX5B_015109
Putative GPI ethanolamine phosphate transferase 3.
    
 0.948
SMAX5B_006232
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
   
 
 0.937
SMAX5B_012419
Mannosyltransferase.
     
 0.935
SMAX5B_014839
Putative GPI transamidase component PIG-T.
     
 0.920
ENSSMAP00000015805
Phosphatidylinositol glycan anchor biosynthesis, class S.
     
 0.888
SMAX5B_005879
Putative glycosylphosphatidylinositol anchor attachment 1 protein.
     
 0.877
SMAX5B_001840
Putative GPI ethanolamine phosphate transferase 1 isoform 3.
    
 0.861
SMAX5B_008074
Putative phosphatidylinositol glycan anchor biosynthesis class U protein.
     
 0.860
ENSSMAP00000011936
Serine palmitoyltransferase, long chain base subunit 1.
     
 0.860
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.