Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
REM1GTP-binding protein REM 1. (318 aa)    
Predicted Functional Partners:
SMAX5B_020281
Putative FERM and PDZ domain-containing protein 2.
    
 0.691
SMAX5B_007873
Putative RING-H2 finger protein ATL58-like.
   
 0.682
SMAX5B_007298
Uncharacterized protein.
    
 0.668
SMAX5B_012637
Putative intersectin-2.
    
 0.661
SMAX5B_008282
Putative intersectin-2.
    
 0.661
SMAX5B_007514
Putative tuberin-like.
    
 0.652
SMAX5B_002620
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.625
SMAX5B_021325
Putative neurofibromin.
    
 0.592
SMAX5B_022102
Met proto-oncogene (Hepatocyte growth factor receptor)-like.
   
 0.586
SMAX5B_014380
Putative macrophage-stimulating protein receptor-like.
   
 0.586
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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