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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_014096Putative aminopeptidase NPEPL1. (523 aa)    
Predicted Functional Partners:
CBS
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
   
 0.798
SMAX5B_012704
Aspartate aminotransferase.
   
 0.790
SMAX5B_014825
Beta-citrylglutamate synthase B.
  
 
 0.785
SMAX5B_005573
Putative ATP-dependent RNA helicase DDX27; Belongs to the DEAD box helicase family.
    
 0.709
ENSSMAP00000015865
Glutamate-cysteine ligase, modifier subunit.
   
  0.704
SMAX5B_007911
Putative selenocysteine lyase.
  
 
 0.679
SMAX5B_002787
Putative cysteine desulfurase mitochondrial-like.
  
 
 0.679
SMAX5B_006853
Putative gamma-glutamylaminecyclotransferase.
    
  0.670
SMAX5B_022673
Putative cystathionine gamma-lyase isoform 2.
   
 
 0.668
UQCRFS1
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
 
  0.666
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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