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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_017362Mta3 protein. (700 aa)    
Predicted Functional Partners:
SMAX5B_000354
Histone-binding protein RBBP4.
   
 0.914
SMAX5B_002919
Histone-binding protein RBBP7.
   
 0.914
SMAX5B_006941
WD_REPEATS_REGION domain-containing protein.
   
 0.914
SMAX5B_006568
Putative methyl-CpG-binding domain protein 3-like.
   
 0.906
SMAX5B_022240
Putative methyl-CpG-binding domain protein 3-like.
   
 0.906
SMAX5B_002985
Putative methyl-CpG-binding domain protein 2-like.
   
 0.906
SMAX5B_005264
Putative WD repeat-containing protein 73.
   
 0.902
ENSSMAP00000031618
PHD finger protein 21Ab.
   
 0.869
ENSSMAP00000010564
Chromodomain helicase DNA binding protein 3.
   
 0.860
ENSSMAP00000018351
Chromodomain helicase DNA binding protein 4b.
   
 0.860
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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