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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_000487Acylphosphatase. (1156 aa)    
Predicted Functional Partners:
SMAX5B_008532
Putative DNA mismatch repair protein Mlh1.
    
0.998
SMAX5B_000273
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.973
SMAX5B_017299
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.973
SMAX5B_010457
Putative DNA mismatch repair protein Msh3; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.967
SMAX5B_016826
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.960
SMAX5B_011692
Putative mutS protein-like 5 isoform 2.
 
 0.959
ENSSMAP00000029939
annotation not available
  
 0.948
SMAX5B_010392
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.907
SMAX5B_009968
Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.
   
 0.904
SMAX5B_008107
Putative vacuolar protein sorting-associated protein VTA1-like.
    
   0.897
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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