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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_008119YccV-like domain containing protein. (230 aa)    
Predicted Functional Partners:
SMAX5B_018361
Putative E3 SUMO-protein ligase RanBP2.
   
 0.721
SMAX5B_003791
Putative suppressor of hairless protein-like.
   
 0.650
ENSSMAP00000015627
Recombination signal binding protein for immunoglobulin kappa J region-like.
   
 0.650
SMAX5B_007424
Putative recombining binding protein suppressor of hairless-like.
   
 0.650
SMAX5B_002122
Putative DPH3-like.
    
 
 0.626
ENSSMAP00000003962
Zinc finger, AN1-type domain 4.
    
 0.606
SMAX5B_022229
Serine/threonine-protein kinase Nek7 isoform 3; Belongs to the protein kinase superfamily.
    
 0.603
SMAX5B_002465
GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.594
SMAX5B_015842
Putative brain-specific angiogenesis inhibitor 1-like; Belongs to the G-protein coupled receptor 2 family.
    
 0.594
SMAX5B_010956
Putative G-protein coupled receptor 133; Belongs to the G-protein coupled receptor 2 family.
    
 0.594
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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