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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_007980Putative zinc finger protein 408-like. (845 aa)    
Predicted Functional Partners:
SMAX5B_011678
Putative G patch domain-containing protein 3.
   
    0.957
SMAX5B_019619
Putative adenylate kinase 9 isoform 2.
    
  0.873
F2RL2
G_PROTEIN_RECEP_F1_2 domain-containing protein.
    
  0.822
SMAX5B_017015
G_PROTEIN_RECEP_F1_2 domain-containing protein.
    
  0.822
ENSSMAP00000011455
Serpin peptidase inhibitor, clade D (heparin cofactor), member 1.
    
  0.817
SMAX5B_004485
Fibrinogen beta chain isoform 2.
   
  0.810
SMAX5B_011451
Putative fibrinogen gamma chain.
    
  0.803
SMAX5B_020680
Putative E3 ubiquitin-protein ligase RNF25.
   
    0.775
SMAX5B_008126
Putative thrombomodulin-like.
    
  0.707
SMAX5B_003400
Putative thrombomodulin-like.
    
  0.707
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.