STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_017758Putative LIM domain-binding protein 3. (238 aa)    
Predicted Functional Partners:
ENSSMAP00000008931
Ras suppressor protein 1.
   
 0.967
ILK
Integrin-linked protein kinase.
   
 0.944
ENSSMAP00000014149
Integrin-linked kinase.
   
 0.944
SMAX5B_017353
Putative LIM domain-binding protein 3-like.
 
      0.899
ENSSMAP00000011790
Parvin, beta.
   
 0.869
SMAX5B_002897
Putative gamma-parvin.
   
 0.869
SMAX5B_015385
Putative alpha-parvin.
   
 0.869
SMAX5B_010010
Putative p53-induced protein with a death domain-like.
    
 0.836
SMAX5B_015088
Uncharacterized protein.
   
 0.783
SMAX5B_012885
Ribonuclease P protein subunit p20; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences.
   
 0.783
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.