Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SMAX5B_001899Putative rho guanine nucleotide exchange factor 4. (2331 aa)    
Predicted Functional Partners:
SMAX5B_016705
Ras-related C3 botulinum toxin substrate 3.
    
 0.960
SMAX5B_004378
Ras-related C3 botulinum toxin substrate 1.
    
 0.960
SMAX5B_016755
Putative adenomatous polyposis coli protein 2.
    
 0.959
SMAX5B_001599
Putative spermatogenesis-associated protein 13.
  
  
 
0.903
CDC42
Cell division control protein 42-like isoform 2.
    
 0.870
ENSSMAP00000029025
annotation not available
    
 0.870
SMAX5B_012003
Cell division control protein 42-like isoform 2.
    
 0.744
SMAX5B_003136
Cell division control protein 42-like.
    
 0.744
SMAX5B_012637
Putative intersectin-2.
    
 0.684
SMAX5B_008282
Putative intersectin-2.
    
 0.684
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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