STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_005847Putative calsyntenin-2-like. (943 aa)    
Predicted Functional Partners:
SMAX5B_019978
Putative kinesin light chain 1-like.
    
 
 0.674
SMAX5B_010560
Putative kinesin light chain 2-like.
    
 
 0.673
SMAX5B_009125
Putative kinesin light chain 1.
    
 
 0.673
SMAX5B_016875
Kinesin light chain 1.
    
 
 0.673
SMAX5B_001966
Putative nephrocystin-3-like.
    
 
 0.548
SMAX5B_019870
Putative amyloid-like protein 2-like isoform 2.
   
 
 0.481
APP
Amyloid beta A4 protein.
   
 
 0.470
SMAX5B_018690
Putative amyloid beta A4 protein-like.
   
 
 0.470
SMAX5B_011791
Putative IGF-like family receptor 1.
    
 
 0.433
SMAX5B_006412
DUF4559 domain containing protein.
    
 
 0.433
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.