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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_012444Putative programmed cell death protein 2. (368 aa)    
Predicted Functional Partners:
SMAX5B_020723
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.898
SMAX5B_017458
Protein BCCIP homolog; Belongs to the BCP1 family.
   
  
 0.771
SMAX5B_016786
Putative WD repeat-containing and planar cell polarity effector protein fritz-like.
    
 
 0.738
SMAX5B_008552
Putative 28S ribosomal protein S5 mitochondrial; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.728
ENSSMAP00000034134
LTV1 ribosome biogenesis factor.
   
  
 0.679
SMAX5B_011956
Putative UPF0661 TPR repeat-containing protein C16D10.01c-like isoform 2.
   
  
 0.607
ENSSMAP00000001158
Zinc finger protein 277.
   
 
 0.605
SMAX5B_008506
RNA-binding protein PNO1 isoform 2.
   
  
 0.587
SMAX5B_004727
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
    0.572
SMAX5B_015014
Putative pre-rRNA-processing protein TSR2-like.
   
  
 0.565
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.