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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_008016Putative 7SK snRNA methylphosphate capping enzyme-like isoform 2. (634 aa)    
Predicted Functional Partners:
SMAX5B_016645
Putative la-related protein 7 isoform 3.
    
 
 0.938
ENSSMAP00000011182
Cyclin-dependent kinase 9 (CDC2-related kinase).
    
 
 0.882
SMAX5B_016489
Putative squamous cell carcinoma antigen recognized by T-cells 3.
    
 
 0.790
SMAX5B_011221
Uncharacterized protein.
    
 
 0.783
SMAX5B_011963
Putative U4/U6 small nuclear ribonucleoprotein Prp3 isoform 2.
    
 
 0.721
SMAX5B_013487
U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; RNA N6-methyltransferase that methylates adenosine residues of a subset of RNAs and plays a key role in S-adenosyl-L-methionine homeostasis by regulating expression of MAT2A transcripts. Able to N6- methylate a subset of mRNAs and U6 small nuclear RNAs (U6 snRNAs). In contrast to the METTL3-METTL14 heterodimer, only able to methylate a limited number of RNAs: requires both a 5'UACAGAGAA-3' nonamer sequence and a specific RNA structure. In presence of S-adenosyl-L-methionine, binds the 3'-UTR region of MAT2A mRNA and specifical [...]
    
 
 0.678
SMAX5B_011843
U4/U6 small nuclear ribonucleoprotein Prp31.
    
 
 0.670
SMAX5B_006882
Putative U4/U6 small nuclear ribonucleoprotein Prp4.
   
   0.662
SMAX5B_010605
Small nuclear ribonucleoprotein F.
    
   0.638
ENSSMAP00000010963
Small nuclear ribonucleoprotein polypeptides B and B1.
    
 
 0.619
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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