STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_021009Putative inactive rhomboid protein 1. (818 aa)    
Predicted Functional Partners:
SMAX5B_000320
Putative disintegrin and metalloproteinase domain-containing protein 17.
    
 0.686
SMAX5B_022408
Putative disintegrin and metalloproteinase domain-containing protein 10-like isoform 4.
    
 0.618
SMAX5B_012496
Putative disintegrin and metalloproteinase domain-containing protein 10.
    
 0.528
SMAX5B_010072
Putative disintegrin and metalloproteinase domain-containing protein 10-like.
    
 0.528
SMAX5B_012552
Putative methenyltetrahydrofolate synthase domain-containing protein.
  
    0.503
SMAX5B_021202
5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
  
    0.503
SMAX5B_009807
Putative N-acetylgalactosamine kinase.
    
  0.497
ENSSMAP00000030278
Galactokinase 1.
    
  0.497
SMAX5B_010003
Putative stomatin-like protein 1 isoform 2.
  
 0.474
SMAX5B_020153
Leucine carboxyl methyltransferase 1; Methylates the carboxyl group of the C-terminal leucine residue of protein phosphatase 2A catalytic subunits to form alpha- leucine ester residues; Belongs to the methyltransferase superfamily. LCMT family.
      
 0.459
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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