close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_017911Erlin-1. (332 aa)    
Predicted Functional Partners:
SMAX5B_003510
Putative E3 ubiquitin-protein ligase RNF185.
   
 0.794
RNF5
Putative E3 ubiquitin-protein ligase RNF5.
   
 0.794
SMAX5B_011776
Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.
    
 0.732
SMAX5B_015174
RING finger protein 170 isoform 2.
    
 
 0.731
SMAX5B_007542
Putative transitional endoplasmic reticulum ATPase-like; Belongs to the AAA ATPase family.
   
 0.727
SMAX5B_010967
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
   
 0.727
SMAX5B_008147
Fibronectin type-II domain-containing protein.
     
 0.715
SMAX5B_002062
Putative pre-mRNA-splicing factor CWC25-like isoform 2.
   
    0.714
SPATA5
Putative spermatogenesis-associated protein 5.
   
 0.698
SMAX5B_012720
Putative spermatogenesis-associated protein 5-like protein 1 isoform 3.
   
 0.698
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.