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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_019400Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (572 aa)    
Predicted Functional Partners:
SMAX5B_016930
Putative gamma-aminobutyric acid receptor subunit beta-1; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.824
GABRB3
Putative gamma-aminobutyric acid receptor subunit beta-3-like; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.817
SMAX5B_016925
Putative gamma-aminobutyric acid receptor subunit gamma-1; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
 
0.817
SMAX5B_007850
Putative gamma-aminobutyric acid receptor subunit beta-3-like; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.816
SMAX5B_019392
Putative gamma-aminobutyric acid receptor subunit gamma-2; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
 
0.814
SMAX5B_004125
Putative gamma-aminobutyric acid receptor subunit beta-4; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.814
GABRG3
Putative gamma-aminobutyric acid receptor subunit gamma-3-like; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
 
0.813
GABRB2
Putative gamma-aminobutyric acid receptor subunit beta-2-like; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.813
SMAX5B_008878
Putative gamma-aminobutyric acid receptor subunit beta-2-like; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.812
GABRG3-2
Putative gamma-aminobutyric acid receptor subunit gamma-3; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
 
0.811
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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