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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_010626Putative mTERF domain-containing protein 3 mitochondrial-like. (379 aa)    
Predicted Functional Partners:
SMAX5B_010458
Putative synaptobrevin-like YKT6 isoform 4; Belongs to the synaptobrevin family.
     
 0.738
ENSSMAP00000016109
Ribosomal protein L23a.
    
   0.711
SMAX5B_016253
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
    
 
 0.689
SMAX5B_002294
Putative 39S ribosomal protein L20 mitochondrial; Belongs to the bacterial ribosomal protein bL20 family.
    
 
 0.652
SMAX5B_003671
Putative ribosome-recycling factor mitochondrial isoform 2.
    
 
 0.646
SMAX5B_019671
Putative 39S ribosomal protein L19 mitochondrial.
   
 
 0.641
SMAX5B_010602
40S ribosomal protein S16 isoform 2; Belongs to the universal ribosomal protein uS9 family.
    
   0.638
SMAX5B_010113
60S ribosomal protein L4-B.
    
   0.638
SMAX5B_003088
Putative 39S ribosomal protein L4 mitochondrial.
    
   0.638
SMAX5B_016810
Putative 39S ribosomal protein L2 mitochondrial.
   
 
 0.627
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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