STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_013741Putative nucleolar protein 7 isoform 2. (284 aa)    
Predicted Functional Partners:
SMAX5B_015420
Putative cirhin.
    
   0.922
SMAX5B_000564
Putative WD repeat-containing protein 43-like.
    
   0.910
SMAX5B_021660
Putative WD repeat-containing protein 75.
    
   0.898
ENSSMAP00000011592
UTP15 small subunit processome component.
    
   0.889
ENSSMAP00000029738
Nucleolar protein 11.
    
   0.889
ENSSMAP00000008296
FCF1 rRNA-processing protein.
   
 
 0.829
ENSSMAP00000033166
Ribosomal protein S5.
   
 
 0.779
SMAX5B_002570
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
   0.757
SMAX5B_000064
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
 
 0.756
SMAX5B_012186
Putative ribosomal RNA small subunit methyltransferase NEP1.
   
   0.752
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.