STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_000467Putative ribosomal protein S6 kinase-like 1. (739 aa)    
Predicted Functional Partners:
SMAX5B_014176
Syntaxin-18 isoform 2.
    
 0.872
SMAX5B_000851
Putative RAD50-interacting protein 1.
    
 0.870
SMAX5B_022581
Putative vesicle transport protein USE1 isoform 2.
    
 0.869
ENSSMAP00000013446
Zw10 kinetochore protein.
    
 0.831
SMAX5B_012495
Putative vascular endothelial growth factor D isoform 2; Belongs to the PDGF/VEGF growth factor family.
    
  0.820
SMAX5B_008189
Putative neuroblastoma-amplified sequence.
   
 0.810
SMAX5B_001163
Putative vesicle-trafficking protein SEC22a-like; Belongs to the synaptobrevin family.
   
 0.725
SMAX5B_006260
Putative vesicle-trafficking protein SEC22b-like; Belongs to the synaptobrevin family.
   
 0.725
SMAX5B_022251
Putative vesicle-trafficking protein SEC22b-like; Belongs to the synaptobrevin family.
   
 0.725
SMAX5B_001927
Putative vesicle-trafficking protein SEC22c; Belongs to the synaptobrevin family.
   
 0.725
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.