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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_009792Pepsinogen C; Belongs to the peptidase A1 family. (384 aa)    
Predicted Functional Partners:
SMAX5B_005368
Liver angiotensinogen isoform 2; Belongs to the serpin family.
   
 0.801
SMAX5B_019132
Cathepsin F isoform 2; Belongs to the peptidase C1 family.
   
 0.789
SMAX5B_013458
Cathepsin C isoform 2; Belongs to the peptidase C1 family.
   
 0.781
SMAX5B_019172
Cathepsin O isoform 2; Belongs to the peptidase C1 family.
   
 0.766
SMAX5B_009907
Putative pro-cathepsin H; Belongs to the peptidase C1 family.
   
 0.756
SMAX5B_012693
Cathepsin B; Belongs to the peptidase C1 family.
   
 0.723
CTSB
Cathepsin B; Belongs to the peptidase C1 family.
   
 0.723
SMAX5B_012055
Putative serine carboxypeptidase CPVL; Belongs to the peptidase S10 family.
   
 0.721
SMAX5B_018441
Putative renin receptor isoform 3.
   
 0.712
CTSZ
Putative cathepsin Z; Belongs to the peptidase C1 family.
   
 0.711
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.