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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000008296FCF1 rRNA-processing protein. (197 aa)    
Predicted Functional Partners:
SMAX5B_002570
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 0.999
SMAX5B_013843
Putative nucleolar protein 14.
   
 0.999
SMAX5B_001798
Uncharacterized protein.
   
 0.999
SMAX5B_000064
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.999
SMAX5B_011302
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
 0.999
SMAX5B_005010
Putative DDB1-and CUL4-associated factor 13.
   
 0.999
SMAX5B_012186
Putative ribosomal RNA small subunit methyltransferase NEP1.
   
 0.999
SMAX5B_014812
Putative WD repeat-containing protein 46 isoform 2.
   
 0.999
SMAX5B_017791
Putative uromodulin-like.
   
 0.999
SMAX5B_012047
Putative 40S ribosomal protein S9 isoform 2; Belongs to the universal ribosomal protein uS4 family.
   
 0.999
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.