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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_002619Putative keratin type II cytoskeletal 8-like; Belongs to the intermediate filament family. (639 aa)    
Predicted Functional Partners:
SMAX5B_015038
Putative ubiquitin-conjugating enzyme E2 variant 1-like isoform 2.
   
 0.900
ENSSMAP00000008002
Ribosomal protein S27a.
    
  0.701
SMAX5B_008759
Putative BAG family molecular chaperone regulator 3.
    
 
 0.692
SMAX5B_002688
Putative keratin type II cytoskeletal 5-like isoform 2; Belongs to the intermediate filament family.
  
0.682
SMAX5B_001895-2
Putative keratin type I cytoskeletal 14-like isoform 3; Belongs to the intermediate filament family.
  
0.641
SMAX5B_001895
Putative keratin type I cytoskeletal 14-like; Belongs to the intermediate filament family.
  
0.640
SMAX5B_020043
Putative keratin type I cytoskeletal 13-like; Belongs to the intermediate filament family.
  
0.639
SMAX5B_002699
Putative keratin type I cytoskeletal 18-like isoform 2; Belongs to the intermediate filament family.
   
0.638
SMAX5B_001672
Putative keratin type I cytoskeletal 19-like; Belongs to the intermediate filament family.
  
0.638
SMAX5B_020050
Putative keratin type I cytoskeletal 13-like; Belongs to the intermediate filament family.
  
0.634
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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