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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_009945Selenide water dikinase 1. (392 aa)    
Predicted Functional Partners:
SMAX5B_016641
O-phosphoseryl-tRNA(Sec) selenium transferase; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis.
     
 0.900
SMAX5B_007911
Putative selenocysteine lyase.
    
 0.896
MOCOS
Molybdenum cofactor sulfurase; Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form.
    
 0.878
SMAX5B_018734
Putative thioredoxin reductase 2 mitochondrial.
  
 
 0.864
SMAX5B_021802
Putative thioredoxin reductase 1 cytoplasmic-like.
  
 
 0.863
SMAX5B_002787
Putative cysteine desulfurase mitochondrial-like.
    
 0.826
SMAX5B_005013
Putative thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 3.
    
 0.738
SMAX5B_009362
Putative thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 1.
    
 0.738
SMAX5B_020475
Putative glutaredoxin 2.
    
 0.671
SMAX5B_003799
Thioredoxin isoform 3.
    
 0.666
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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