STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_012526Putative GC-rich sequence DNA-binding factor 2-like. (890 aa)    
Predicted Functional Partners:
SMAX5B_010854
Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Belongs to the TFP11/STIP family.
    
 0.859
DHX15
Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
    
 0.810
SMAX5B_016628
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform 2.
    
 0.810
SMAX5B_003453
Pre-mRNA-splicing factor syf2.
    
  0.793
SMAX5B_002358
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.732
SMAX5B_017327
Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32.
    
 0.727
SMAX5B_002991
Putative ATP-dependent RNA helicase DQX1.
    
 0.727
SMAX5B_005397
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32.
    
 0.727
ENSSMAP00000024861
annotation not available
    
 
 0.723
SMAX5B_013355
Putative pre-mRNA-processing-splicing factor 8.
    
   0.723
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.