STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_008144Putative fermitin family-like 1. (664 aa)    
Predicted Functional Partners:
SMAX5B_002304
Putative filamin-binding LIM protein 1-like.
    
 0.826
ILK
Integrin-linked protein kinase.
   
 
 0.811
ENSSMAP00000014149
Integrin-linked kinase.
   
 
 0.811
ENSSMAP00000020695
Integrin, beta 6.
   
 0.775
SMAX5B_020151
Integrin beta.
   
 0.764
SMAX5B_007951
Putative lipoma-preferred partner.
    
 0.746
SMAX5B_001482
Putative thyroid receptor-interacting protein 6-like.
    
 0.746
SMAX5B_015913
Integrin beta; Belongs to the integrin beta chain family.
   
 0.741
ENSSMAP00000004730
Integrin, beta 1a.
   
 0.722
SMAX5B_018285
Putative integrin beta-like protein 1.
   
 0.722
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.