STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_022248Putative paired amphipathic helix protein Sin3b-like. (1222 aa)    
Predicted Functional Partners:
SMAX5B_016772
Histone deacetylase complex subunit SAP30L.
    
 0.966
SMAX5B_016833
Putative AT-rich interactive domain-containing protein 4B isoform 2.
    
 0.963
SMAX5B_001062
Putative AT-rich interactive domain-containing protein 4A isoform 2.
    
 0.963
HDAC3
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.945
SMAX5B_016138
Uncharacterized protein.
   
 0.936
SMAX5B_008402
Putative PHD finger protein 12.
   
 
 0.914
SMAX5B_014558
Putative bromodomain-containing protein 4-like.
    
 0.911
SMAX5B_003473
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.897
SMAX5B_016328
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.897
ENSSMAP00000015627
Recombination signal binding protein for immunoglobulin kappa J region-like.
   
 0.895
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.