STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_005089Putative sorting nexin-1-like. (635 aa)    
Predicted Functional Partners:
SMAX5B_010404
Putative cyclin-G-associated kinase-like.
   
 0.983
SMAX5B_003242
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 0.967
SMAX5B_008973
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
   
 0.965
SMAX5B_016816
Sorting nexin; Involved in several stages of intracellular trafficking.
   
0.958
SMAX5B_001059
Sorting nexin; Involved in several stages of intracellular trafficking.
   
0.958
SMAX5B_012319
Putative vacuolar protein sorting-associated protein 26A-like.
   
 
 0.896
ENSSMAP00000010117
annotation not available
   
 
 0.873
SMAX5B_004552
Vacuolar protein sorting-associated protein 26b-like.
   
 
 0.873
SMAX5B_014155
Putative sorting nexin-5-like.
   
 0.813
SMAX5B_000032
Putative cation-independent mannose-6-phosphate receptor.
    
 0.790
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.