STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_001569Putative bifunctional protein NCOAT-like. (697 aa)    
Predicted Functional Partners:
ENSSMAP00000010356
annotation not available
   
 
 0.547
OGT
O-GlcNAc transferase variant 1.
   
 
 0.547
SMAX5B_018981
Putative nucleophosmin-like.
   
 
 0.506
SMAX5B_004210
Putative nucleophosmin-like isoform 5.
   
 
 0.506
SMAX5B_022063
Putative 39S ribosomal protein L41 mitochondrial isoform 2.
    
  0.503
SMAX5B_009445
Mitochondrial ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
   
  0.449
SMAX5B_015620
Putative 39S ribosomal protein L3 mitochondrial; Belongs to the universal ribosomal protein uL3 family.
    
  0.442
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.