STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_017223Putative matrin-3 isoform 2. (1107 aa)    
Predicted Functional Partners:
SMAX5B_013814
Putative heterogeneous nuclear ribonucleoprotein K-like.
   
 
 0.724
SMAX5B_016556
Putative heterogeneous nuclear ribonucleoprotein K-like.
   
 
 0.724
SMAX5B_007298
Uncharacterized protein.
   
  0.712
SMAX5B_022369
Putative heterogeneous nuclear ribonucleoprotein M-like.
   
 
 0.689
PTK7
Putative inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.688
ENSSMAP00000001280
Leucine-rich repeats and guanylate kinase domain containing.
    
 0.681
SMAX5B_002184
TAR DNA-binding protein 43.
   
 
 0.676
SMAX5B_014816
TAR DNA-binding protein 43.
   
 
 0.676
SMAX5B_004819
Putative receptor-interacting serine/threonine-protein kinase 4.
   
  0.674
SMAX5B_000286
Putative tonsoku-like protein-like isoform 2.
   
  0.667
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.