STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000009944Ubiquitin-conjugating enzyme E2D 4 (putative). (147 aa)    
Predicted Functional Partners:
SMAX5B_015038
Putative ubiquitin-conjugating enzyme E2 variant 1-like isoform 2.
   
0.999
SMAX5B_010186
Putative E3 ubiquitin-protein ligase TRIP12-like isoform 2.
   
 0.960
SMAX5B_020092
Pentaxin multi-domain protein.
   
 0.959
SMAX5B_000328
Putative Fanconi anemia group M protein.
    
 0.914
SMAX5B_001993
Anaphase-promoting complex subunit 11.
    
 0.912
SMAX5B_008528
Putative baculoviral IAP repeat-containing protein 6-like.
   
0.909
SMAX5B_006467
Putative RING-box protein 1-like.
   
 0.908
ENSSMAP00000008002
Ribosomal protein S27a.
   
 0.903
SMAX5B_009686
Cullin-1; Belongs to the cullin family.
   
 0.885
ENSSMAP00000000415
annotation not available
   
 0.882
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.