STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_013112Putative interferon regulatory factor 1-like. (263 aa)    
Predicted Functional Partners:
SMAX5B_019272
Putative E3 ubiquitin-protein ligase Mdm2; Belongs to the MDM2/MDM4 family.
    
  0.877
SMAX5B_014374
RanBP2-type domain-containing protein.
    
  0.852
IRF-1
Interferon regulatory factor.
  
  
 
0.847
SMAX5B_014234
Putative sulfite oxidase mitochondrial.
     
 0.771
SMAX5B_001941
Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.
   
 0.749
SMAX5B_012850
Uncharacterized protein.
     
 0.710
SMAX5B_020092
Pentaxin multi-domain protein.
    
 
 0.695
SMAX5B_016568
Transmembrane emp24 domain-containing protein 7 isoform 2.
   
 0.665
SMAX5B_006549
Putative TIR domain-containing adapter molecule 1-like.
   
 0.665
SMAX5B_013194
Putative transmembrane emp24 domain-containing protein 3-like.
   
 0.665
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
Server load: low (26%) [HD]