STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF146Putative E3 ubiquitin-protein ligase rnf146-like. (408 aa)    
Predicted Functional Partners:
SMAX5B_015113
Poly [ADP-ribose] polymerase.
    
 0.949
ENSSMAP00000031340
Tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase b.
    
 0.949
SMAX5B_011353
Putative axin-1-like.
    
 0.803
SMAX5B_008572
Putative axin-1.
    
 0.803
AXIN2
Axin 2.
    
 0.803
SMAX5B_019576
Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.
    
 
 0.795
SMAX5B_006454
Poly [ADP-ribose] polymerase.
    
 
 0.787
SMAX5B_007879
Putative chromodomain-helicase-DNA-binding protein 1-like.
    
 
 0.750
ENSSMAP00000008002
Ribosomal protein S27a.
   
  0.725
ENSSMAP00000016939
Proteasome 26S subunit, non-ATPase 10.
    
  0.714
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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