STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_020185Golgi to ER traffic protein 4-like. (323 aa)    
Predicted Functional Partners:
ENSSMAP00000027199
Guided entry of tail-anchored proteins factor 3, ATPase.
    
 0.997
ENSSMAP00000026996
BCL2 associated athanogene 6.
    
 0.992
ENSSMAP00000011658
Ubiquitin like 4A.
    
 0.944
SMAX5B_004119
Uncharacterized protein.
   
 0.923
SMAX5B_013959
Putative small glutamine-rich tetratricopeptide repeat-containing protein beta.
   
 0.923
SMAX5B_016752
Putative small glutamine-rich tetratricopeptide repeat-containing protein alpha isoform 2.
   
 0.923
SMAX5B_013819
Putative tetratricopeptide repeat protein 33.
   
 0.886
ENSSMAP00000002558
RAD23 homolog A, nucleotide excision repair protein a.
    
 0.837
ENSSMAP00000008235
annotation not available
    
 0.837
ENSSMAP00000008247
annotation not available
    
 0.837
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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