STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_002405Uncharacterized protein. (447 aa)    
Predicted Functional Partners:
SMAX5B_018474
X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.
    
 0.961
SMAX5B_022695
DNA ligase.
    
 0.932
SMAX5B_008231
Putative glycerophosphocholine phosphodiesterase GPCPD1.
    
 0.929
SMAX5B_020350
Putative X-ray repair cross-complementing protein 6.
    
 0.908
ENSSMAP00000014987
annotation not available
    
 0.854
SMAX5B_007184
DNA ligase.
    
 0.803
SMAX5B_021549
DNA ligase.
    
 0.803
SMAX5B_001553
Putative DNA-dependent protein kinase catalytic subunit; Belongs to the PI3/PI4-kinase family.
    
 0.764
SMAX5B_002620
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.764
SMAX5B_001387
Putative serine/threonine-protein kinase SMG1 isoform 2; Belongs to the PI3/PI4-kinase family.
    
 0.764
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.