SMAX5B_006041 protein (Scophthalmus maximus)

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second shell of interactors

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proteins of unknown 3D structure

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Edges represent protein-protein associations

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

SMAX5B_006041

Putative trinucleotide repeat-containing 18 protein. (3105 aa)

Predicted Functional Partners:

SMAX5B_019619

0.878

SMAX5B_000427

0.876

SMAX5B_018361

0.717

SMAX5B_002807

0.712

SMAX5B_016962

0.712

SMAX5B_019267

0.703

SMAX5B_021281

0.701

SMAX5B_020988

0.691

SMAX5B_001485

0.690

SMAX5B_016849

0.690

Your Current Organism:

Scophthalmus maximus

NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SMAX5B_000427	SMAX5B_006041	ENSSMAP00000004414	ENSSMAP00000010596	Uncharacterized protein.	Putative trinucleotide repeat-containing 18 protein.	0.876
SMAX5B_001485	SMAX5B_006041	ENSSMAP00000015745	ENSSMAP00000010596	Putative hepatocyte growth factor activator.	Putative trinucleotide repeat-containing 18 protein.	0.690
SMAX5B_001485	SMAX5B_016849	ENSSMAP00000015745	ENSSMAP00000018802	Putative hepatocyte growth factor activator.	Hyaluronan binding protein 2.	0.653
SMAX5B_001485	SMAX5B_018361	ENSSMAP00000015745	ENSSMAP00000011896	Putative hepatocyte growth factor activator.	Putative E3 SUMO-protein ligase RanBP2.	0.484
SMAX5B_001485	SMAX5B_019619	ENSSMAP00000015745	ENSSMAP00000023479	Putative hepatocyte growth factor activator.	Putative adenylate kinase 9 isoform 2.	0.859
SMAX5B_002807	SMAX5B_006041	ENSSMAP00000006303	ENSSMAP00000010596	Retinoblastoma-binding protein 5.	Putative trinucleotide repeat-containing 18 protein.	0.712
SMAX5B_002807	SMAX5B_016962	ENSSMAP00000006303	ENSSMAP00000013685	Retinoblastoma-binding protein 5.	Ash2-like.	0.999
SMAX5B_006041	SMAX5B_000427	ENSSMAP00000010596	ENSSMAP00000004414	Putative trinucleotide repeat-containing 18 protein.	Uncharacterized protein.	0.876
SMAX5B_006041	SMAX5B_001485	ENSSMAP00000010596	ENSSMAP00000015745	Putative trinucleotide repeat-containing 18 protein.	Putative hepatocyte growth factor activator.	0.690
SMAX5B_006041	SMAX5B_002807	ENSSMAP00000010596	ENSSMAP00000006303	Putative trinucleotide repeat-containing 18 protein.	Retinoblastoma-binding protein 5.	0.712
SMAX5B_006041	SMAX5B_016849	ENSSMAP00000010596	ENSSMAP00000018802	Putative trinucleotide repeat-containing 18 protein.	Hyaluronan binding protein 2.	0.690
SMAX5B_006041	SMAX5B_016962	ENSSMAP00000010596	ENSSMAP00000013685	Putative trinucleotide repeat-containing 18 protein.	Ash2-like.	0.712
SMAX5B_006041	SMAX5B_018361	ENSSMAP00000010596	ENSSMAP00000011896	Putative trinucleotide repeat-containing 18 protein.	Putative E3 SUMO-protein ligase RanBP2.	0.717
SMAX5B_006041	SMAX5B_019267	ENSSMAP00000010596	ENSSMAP00000012942	Putative trinucleotide repeat-containing 18 protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.703
SMAX5B_006041	SMAX5B_019619	ENSSMAP00000010596	ENSSMAP00000023479	Putative trinucleotide repeat-containing 18 protein.	Putative adenylate kinase 9 isoform 2.	0.878
SMAX5B_006041	SMAX5B_020988	ENSSMAP00000010596	ENSSMAP00000021942	Putative trinucleotide repeat-containing 18 protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.691
SMAX5B_006041	SMAX5B_021281	ENSSMAP00000010596	ENSSMAP00000034109	Putative trinucleotide repeat-containing 18 protein.	Putative nuclear pore complex protein Nup133.	0.701
SMAX5B_016849	SMAX5B_001485	ENSSMAP00000018802	ENSSMAP00000015745	Hyaluronan binding protein 2.	Putative hepatocyte growth factor activator.	0.653
SMAX5B_016849	SMAX5B_006041	ENSSMAP00000018802	ENSSMAP00000010596	Hyaluronan binding protein 2.	Putative trinucleotide repeat-containing 18 protein.	0.690
SMAX5B_016849	SMAX5B_018361	ENSSMAP00000018802	ENSSMAP00000011896	Hyaluronan binding protein 2.	Putative E3 SUMO-protein ligase RanBP2.	0.484

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Network Stats

number of nodes:

11

number of edges:

55

average node degree:

10

avg. local clustering coefficient:

1

expected number of edges:

22

PPI enrichment p-value:

2.95e-09

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0006412

Translation

11 of 328

1.8

4.86

1.46e-16

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0003735

Structural constituent of ribosome

10 of 159

2.07

6.34

2.75e-17

GO:0019843

rRNA binding

3 of 51

2.05

1.36

0.0024

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0005840

Ribosome

10 of 184

2.01

5.98

5.37e-17

GO:0044391

Ribosomal subunit

4 of 135

1.75

1.71

0.00019

GO:0015935

Small ribosomal subunit

3 of 46

2.09

1.69

0.00050

GO:0022627

Cytosolic small ribosomal subunit

2 of 18

2.32

1.12

0.0086

GO:1990904

Ribonucleoprotein complex

5 of 555

1.23

1.04

0.0012

(more ...)

Reference Publications (PubMed)

publication

(year) title

count in network

strength

signal

false discovery rate

PMID:28942070

(2017) Ryanodine receptor and FK506 binding protein 1 in the Atlantic killifish (Fundulus heteroclitus): A phylogenetic and population-based comparison.

2 of 9

2.62

0.93

0.0209

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:15235