STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_016461Putative ras GTPase-activating protein-binding protein 1-like. (497 aa)    
Predicted Functional Partners:
SMAX5B_012681
Ubiquitin carboxyl-terminal hydrolase.
   
 
 0.958
SMAX5B_009444
Putative nuclear RNA export factor 1.
    
 0.848
SMAX5B_007929
Protein mago nashi-like 2.
    
 0.847
SMAX5B_010127
Putative caprin-1.
   
 
 0.840
SMAX5B_012655
Putative caprin-1-like.
   
 
 0.840
UPF2
Putative regulator of nonsense transcripts 2.
     
 0.814
ENSSMAP00000008250
UPF1 RNA helicase and ATPase.
    
 0.797
UPF1
UPF1 RNA helicase and ATPase.
    
 0.797
SMAX5B_015523
Putative ubiquitin-associated protein 2-like isoform 2.
   
 
 0.748
SMAX5B_000797
Putative tRNA selenocysteine 1-associated protein 1-like.
   
 
 0.733
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.