STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_011866Putative transmembrane protein 145. (575 aa)    
Predicted Functional Partners:
SMAX5B_012115
Putative TBC1 domain family member 31.
    
 0.708
PAFAH1B1
Platelet activating factor acetylhydrolase 1b regulatory subunit 1.
    
 0.708
ENSSMAP00000031987
Platelet-activating factor acetylhydrolase 1b, regulatory subunit 1b.
    
 0.708
SMAX5B_009944
Putative cAMP-dependent protein kinase type II-beta regulatory subunit.
   
 
  0.630
SMAX5B_002732
Putative cAMP-dependent protein kinase type II-alpha regulatory subunit-like.
   
 
  0.630
SMAX5B_022562
Transmembrane protein 59-like.
   
 0.607
SMAX5B_008140
Platelet-activating factor acetylhydrolase.
     
 0.554
SMAX5B_006919
Putative trafficking protein particle complex subunit 11.
   
  
 0.519
SMAX5B_007989
Putative CDKN2A-interacting protein.
      
 0.513
SMAX5B_020254
cAMP-dependent protein kinase type I-alpha regulatory subunit.
   
 
  0.511
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.