STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_004531Putative hepatocyte nuclear factor 1-beta. (573 aa)    
Predicted Functional Partners:
SMAX5B_018749
Putative hepatocyte nuclear factor 1-alpha.
  
 
0.859
SMAX5B_001290
Putative pancreas transcription factor 1 subunit alpha.
     
 0.655
PCBD2
Putative pterin-4-alpha-carbinolamine dehydratase 2.
    
 
 0.630
SMAX5B_008809
Pterin-4-alpha-carbinolamine dehydratase.
    
 
 0.630
SMAX5B_014693
Hnf4a protein.
   
 0.601
SMAX5B_001835
Putative hepatocyte nuclear factor 4-gamma.
   
 0.601
SMAX5B_013155
One cut domain family member.
     
 0.486
SMAX5B_022494
One cut domain family member 1-like.
     
 0.486
SMAX5B_001952
Putative pancreas/duodenum homeobox protein 1.
   
  
 0.452
SMAX5B_012433
Putative hepatocyte nuclear factor 4-beta-like.
   
 0.451
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.