STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCGF3Putative polycomb group RING finger protein 3. (249 aa)    
Predicted Functional Partners:
SMAX5B_001246
E3 ubiquitin-protein ligase RING2.
    
 0.961
SMAX5B_004877
Putative autism susceptibility 2 protein.
    
 0.933
YAF2
Putative YY1-associated factor 2.
    
 0.863
ENSSMAP00000026372
RING1 and YY1 binding protein b.
    
 0.863
SMAX5B_007809
YY1-associated factor 2.
    
 0.863
SMAX5B_020598
Putative fibrosin-1.
    
 0.844
SMAX5B_002459
Putative lysine-specific demethylase 2A isoform 2.
   
 0.823
SMAX5B_003676
Putative lysine-specific demethylase 2B.
   
 0.823
SMAX5B_010985
Putative lysine-specific demethylase 2B-like.
   
 0.823
SMAX5B_004913
Putative lysine-specific demethylase 2A-like.
   
 0.823
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.