STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000012213Tripartite motif containing 33. (1219 aa)    
Predicted Functional Partners:
SMAX5B_016573
Mothers against decapentaplegic homolog.
   
 0.794
SMAX5B_003618
Mothers against decapentaplegic homolog.
   
 0.794
SMAX5B_009744
Mothers against decapentaplegic homolog.
    
 0.778
SMAX5B_021315
Mothers against decapentaplegic homolog.
   
 0.777
SMAX5B_010342
annotation not available
   
 
 0.773
ENSSMAP00000008002
Ribosomal protein S27a.
    
  0.758
SMAX5B_018805
Mothers against decapentaplegic homolog.
    
 0.735
SMAX5B_015124
Mothers against decapentaplegic homolog.
    
 0.735
SMAD3
Mothers against decapentaplegic homolog.
    
 0.735
SMAX5B_017663
Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family.
   
   0.725
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.