STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_021628Uncharacterized protein. (439 aa)    
Predicted Functional Partners:
RIC1
RIC1 domain-containing protein.
    
 0.998
ENSSMAP00000000530
RAB6B, member RAS oncogene family b.
    
 0.814
SMAX5B_007955
Uncharacterized protein.
    
 0.814
SMAX5B_004721
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
    
 0.814
SMAX5B_009372
MGC113973 wu:fi30c11.
    
 0.814
SMAX5B_004090
Ras-related protein Rab-6A.
    
 0.814
SMAX5B_019917
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.795
SMAX5B_003167
Putative vacuolar protein sorting-associated protein 52-like isoform 2.
     
 0.784
SMAX5B_019865
Putative ras-related protein Rab-34.
    
 0.783
SMAX5B_022177
Putative ras-related protein Rab-34-like isoform 3.
    
 0.783
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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