STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_015531Putative biogenesis of lysosome-related organelles complex 1 subunit 4-like. (241 aa)    
Predicted Functional Partners:
SMAX5B_012499
Biogenesis of lysosome-related organelles complex 1 subunit 6; Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO), such as platelet dense granules and melanosomes. In concert with the AP-3 complex, the BLOC-1 complex is required to target membrane protein cargos into vesicles assembled at cell bodies for delivery into neurites and nerve terminals. The BLOC-1 complex, in association with SNARE proteins, is also proposed to be involved in neurite extension. May play a role in intracellular vesicle trafficking, particular [...]
   
 0.962
SMAX5B_005171
Biogenesis of lysosome-related organelles complex 1 subunit 1.
    
 0.960
SMAX5B_015909
Putative dysbindin-like.
   
 0.941
SMAX5B_013350
Biogenesis of lysosome-related organelles complex 1 subunit 3; Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO). Belongs to the BLOC1S3 family.
    
 0.861
ENSSMAP00000034045
SNAP associated protein.
    
 0.747
SMAX5B_001781
Putative biogenesis of lysosome-related organelles complex 1 subunit 5.
    
 
 0.696
SMAX5B_017605
Putative biogenesis of lysosome-related organelles complex 1 subunit 2.
   
 
 0.582
HPS6
Putative Hermansky-Pudlak syndrome 6 protein.
      
 0.520
SMAX5B_007958
Putative thymidylate kinase.
      
 0.459
SMAX5B_018280
Putative extended synaptotagmin-3-like.
      
 0.455
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.