STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000012361annotation not available (210 aa)    
Predicted Functional Partners:
SMAX5B_021979
Collagen type X alpha 1.
 
  
  0.483
ENSSMAP00000029178
Collagen, type VIII, alpha 2.
 
  
  0.466
SMAX5B_018425
Putative fibronectin-like.
   
 0.450
ENSSMAP00000021462
Collagen, type VI, alpha 1.
   
 0.447
ENSSMAP00000025822
Collagen, type VIII, alpha 1b.
 
  
  0.446
ENSSMAP00000016815
annotation not available
   
 0.444
ENSSMAP00000021267
Collagen, type VI, alpha 2.
   
 0.444
SMAX5B_005873
Putative nucleolin-like.
    
 
 0.434
SMAX5B_022640
Putative nucleolin.
    
 
 0.434
SMAX5B_004871
Matrix metallopeptidase 30.
    
  0.423
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.