STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000012546Ninein-like. (1108 aa)    
Predicted Functional Partners:
SMAX5B_018361
Putative E3 SUMO-protein ligase RanBP2.
   
 0.726
SMAX5B_008976
Putative dynactin subunit 1-like.
    
 
 0.685
SMAX5B_012878
Putative dynactin subunit 1-like isoform 3.
    
 
 0.685
SMAX5B_006311
Serine/threonine-protein kinase PLK.
   
 0.675
PLK1
Serine/threonine-protein kinase PLK.
   
 0.675
SMAX5B_010482
Serine/threonine-protein kinase PLK.
   
 0.675
ENSSMAP00000003962
Zinc finger, AN1-type domain 4.
    
 0.671
SMAX5B_003791
Putative suppressor of hairless protein-like.
   
 0.653
ENSSMAP00000015627
Recombination signal binding protein for immunoglobulin kappa J region-like.
   
 0.653
SMAX5B_007424
Putative recombining binding protein suppressor of hairless-like.
   
 0.653
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.