STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000012554BCL6A transcription repressor b. (661 aa)    
Predicted Functional Partners:
SMAX5B_019619
Putative adenylate kinase 9 isoform 2.
    
  0.873
ENSSMAP00000001738
BCL6A transcription repressor a.
  
  
 
0.846
SMAX5B_003997
Putative nuclear receptor corepressor 1 isoform 2.
    
 0.779
SMAX5B_010904
Putative nuclear receptor corepressor 2.
    
 0.779
SMAX5B_001126
Putative nebulin-like isoform 4.
    
   0.728
SMAX5B_007298
Uncharacterized protein.
   
  0.680
ENSSMAP00000000032
annotation not available
    
 
 0.660
ENSSMAP00000000033
annotation not available
    
 
 0.660
SMAX5B_018363
Putative BCL-6 corepressor-like.
    
 
 0.660
ENSSMAP00000021936
annotation not available
    
 
 0.660
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.