STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_010120Putative DNA polymerase subunit gamma-1. (1201 aa)    
Predicted Functional Partners:
ENSSMAP00000029147
Polymerase (DNA directed), gamma 2, accessory subunit.
   
 
 0.978
SMAX5B_020535
Putative twinkle protein mitochondrial.
   
 
 0.928
ENSSMAP00000012328
Ribonuclease H1.
    
 0.912
SMAX5B_019131
Putative endonuclease 8-like 3.
  
  
 0.884
SMAX5B_002376
Putative Fanconi anemia group D2 protein.
   
 0.860
SMAX5B_001711
Glycyl-tRNA synthetase.
   
 
 0.856
ENSSMAP00000022457
glycyl-tRNA synthetase 1.
   
 
 0.856
SMAX5B_013336
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
  
 0.844
SMAX5B_000328
Putative Fanconi anemia group M protein.
   
 
 0.839
SMAX5B_007212
Uncharacterized protein.
   
 
 0.807
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.