STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_009094Mitochondrial antiviral signaling protein. (563 aa)    
Predicted Functional Partners:
SMAX5B_018603
Melanoma differentiation-associated protein 5 isoform 2.
    
 0.948
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.944
IRF3
Mediator of interferon regulatory factor 3.
    
 0.930
SMAX5B_008715
DExD/H box RNA helicase.
    
 0.927
SMAX5B_004060
Putative ATP-dependent RNA helicase DHX33.
    
 0.926
NLRX1
Putative NLR family member X1.
     
 0.922
ENSSMAP00000027300
ATG5 autophagy related 5 homolog (S. cerevisiae).
    
 0.917
SMAX5B_021798
Putative TNF receptor-associated factor 3.
    
 0.913
SMAX5B_005524
Putative TNF receptor-associated factor 5-like.
    
 0.913
SMAX5B_011920
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.
    
 0.907
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.