STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_013794Putative integrin alpha-1; Belongs to the integrin alpha chain family. (1187 aa)    
Predicted Functional Partners:
SMAX5B_007191
Integrin beta; Belongs to the integrin beta chain family.
   
 0.937
ENSSMAP00000004730
Integrin, beta 1a.
   
 0.904
LAMA2
Putative laminin subunit alpha-2.
    
 0.891
SMAX5B_006053
Putative tenascin-N.
   
 0.889
SMAX5B_006176
Putative tenascin-R.
    
 0.888
ENSSMAP00000018733
Zmp:0000000846.
    
 0.888
SMAX5B_022061
Putative tenascin-like.
    
 0.888
SMAX5B_003177
Putative tenascin-like.
    
 0.888
SMAX5B_013855
Putative laminin subunit gamma-3-like.
   
 0.885
SMAX5B_011249
Putative laminin subunit beta-3.
    
 0.882
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.