STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_013070DUF4210 domain-containing protein. (1030 aa)    
Predicted Functional Partners:
SMAX5B_008769
Putative AN1-type zinc finger protein 2A isoform 3.
      
 0.519
WDR7
Putative WD repeat-containing protein 7.
      
 0.509
SMAX5B_010103
Putative ribosome biogenesis protein RLP24.
      
 0.499
SMAX5B_006868
Putative calcyphosin-like protein-like.
      
 0.480
SMAX5B_015109
Putative GPI ethanolamine phosphate transferase 3.
      
 0.456
SMAX5B_022363
High mobility group 20B.
      
 0.452
SMAX5B_017539
Putative metallo-beta-lactamase domain-containing protein 1.
      
 0.444
SMAX5B_009716
Putative AP-4 complex subunit epsilon-1.
      
 0.416
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.