STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_019129Putative RUN and FYVE domain-containing protein 1. (716 aa)    
Predicted Functional Partners:
SMAX5B_012686
Ras-related protein Rab-4A.
    
 0.915
ENSSMAP00000023301
RAB4B, member RAS oncogene family.
    
 0.903
SMAX5B_003584
Putative ras-related protein Rab-14.
    
 0.734
SMAX5B_015253
Putative actin filament-associated protein 1-like 1.
    
 0.734
SMAX5B_018935
Tyrosine-protein kinase.
    
  0.727
SMAX5B_009431
Tyrosine-protein kinase.
    
  0.727
SMAX5B_004494
Tyrosine-protein kinase.
    
  0.727
SMAX5B_004484
Tyrosine-protein kinase.
    
  0.727
SMAX5B_012506
Putative RUN and FYVE domain-containing protein 2-like.
  
 
  
0.725
ENSSMAP00000026826
annotation not available
    
  0.725
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.